Functionally Labeled Histone and Nucleosome Preparation Service

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Precisely labeled histones and nucleosomes are fundamental to dissecting the mechanistic details of chromatin biology. At CD BioSciences, we provide expert, end-to-end preparation of these critical tools, integrating a comprehensive suite of advanced technologies to deliver custom, functionally validated substrates for your most demanding research.

Overview of Functionally Labeled Histone and Nucleosome

At the heart of chromatin and epigenetic regulation lies the nucleosome, the fundamental repeating unit composed of DNA wrapped around a histone protein core. It serves as the central hub where dynamic modifications and interactions dictate gene expression and cellular identity. To mechanistically dissect these complex processes, researchers increasingly rely on functionally labeled histones and nucleosomes—tools that allow precise tracking and interrogation at the molecular level. Site-specific labeling with probes such as fluorophores or biotin enables advanced experimental approaches, including FRET-based conformational studies, single-molecule imaging, interaction pull-down assays, and enzymatic activity profiling. The preparation of these well-defined, homogeneously modified, and functionally intact nucleosomes is therefore a critical prerequisite for cutting-edge research aiming to move beyond correlation and establish direct causation in epigenetic pathways.

Three well-defined epigenetic mechanisms lead to non-random mutations and recombination.

Fig.1 Three well-characterized epigenetic mechanisms contribute to non-random mutation and recombination. (Alvarado S G, et al., 2025)

Our Services

At CD BioSciences, we provide expert, end-to-end preparation of functionally labeled histones and nucleosomes, offering researchers precisely tailored, publication-ready tools to illuminate the mechanisms of epigenetic regulation. Our specialized chemi-biological platform enables site-specific incorporation of probes and modifications, delivering high-purity, structurally defined, and functionally validated nucleosomes for the most demanding biochemical, biophysical, and single-molecule studies.

Functionally Labeled Histone and Nucleosome Preparation Service

Service Description Applications
In Vivo Expression & Labeling Labeling of histones within living cells using genetically encoded tags (e.g., SNAP-tag) or bioorthogonal chemistry for metabolic incorporation. Real-time tracking of histone dynamics, turnover, and localization in live cells; studying histone deposition and variant exchange in a native cellular context.
Chemical Random Labeling Conjugation of probes (fluorophores, biotin) to reactive amino acid side chains (e.g., Lys, Cys) on purified histone proteins or assembled nucleosomes. Rapid feasibility studies, fluorescence-based assays where exact probe position is non-critical, and pull-down experiments requiring bulk labeling.
Chemi-Biological Semi-Synthesis Site-specific ligation of synthetic peptide segments (containing precise labels/modifications) to recombinant protein fragments to generate homogeneously modified, full-length histones or nucleosomes. High-precision mechanistic studies: FRET-based conformational analysis, single-molecule imaging, structural biology (cryo-EM), and enzymatic activity assays with atomic-level control.
Bioorthogonal Chemistry & MS Profiling Metabolic incorporation of chemical tags into nascent histones in cells, followed by click-chemistry enrichment and mass spectrometric analysis to profile modifications and interactions. Proteomic discovery of dynamic PTM patterns on newly synthesized histones, identification of interactors specific to nascent chromatin, and cellular-level epigenetic profiling.
Recombinant Histone & Nucleosome Production High-yield expression of wild-type or mutant histones in E. coli and subsequent in vitro assembly of nucleosomes using purified components and client-specified DNA sequences. Production of foundational, high-purity unlabeled histones and nucleosomes for all downstream applications, custom nucleosome reconstitution for basic biophysical and binding studies.

Service Workflow

Diverse Application Scenarios

  1. Single-molecule studies of chromatin structure & dynamics
  2. Biochemical mechanism analysis of histone-modifying enzymes & chromatin remodeling complexes
  3. Binding and functional studies of epigenetic reader proteins
  4. Drug screening & discovery (targeting epigenetic factors)
  5. Sample preparation for structural biology (e.g., cryo-EM)

Our Advantages

  1. Atomic-Level Precision: Guarantee complete definition of labeling sites and modification states for definitive mechanistic conclusions.
  2. Tailored Flexibility: Support the design and preparation of fully customized nucleosomes with your specified histone variants, PTMs, and functional probes.
  3. Superior Homogeneity & Purity: Deliver publication-ready, structurally defined nucleosomes through rigorous multi-step quality control for reliable data.
  4. Expert Scientific Partnership: Provide dedicated consultation and support from experienced scientists throughout your project for optimal design and execution.
  5. Accelerated Research Timelines: Eliminate the need for in-house method development, saving months of labor and resources to focus on discovery.

In addition to the functionally labeled histones and nucleosomes, CD BioSciences' integrated service platform provides comprehensive support for advanced chromatin research. We offer custom histone & nucleosome PTM service to install defined post-translational modifications, subnucleosomal particle preparation to generate hexasomes and tetrasomes for structural and dynamic studies, and asymmetric nucleosome preparation to reconstitute nucleosomes with differing histone compositions or modifications on each half. Together with our core labeling services, these offerings provide a complete, end-to-end toolkit for mechanistic discovery across biochemistry, biophysics, and structural biology. Contact us today to discuss your specific project requirements with our scientific team.

Reference

1. Alvarado S G, Chang A, Tajerian M. Convergent Evolution and the Epigenome[J]. Epigenomes, 2025, 9(4): 45.

For Research Use Only. Not for use in diagnostic or therapeutic procedures.

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